Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| v1g103289 | v1g103340 | A7S3R1 | A7S3Q8 | Predicted protein. | Predicted protein. | 0.481 |
| v1g103289 | v1g144955 | A7S3R1 | A7T3Y8 | Predicted protein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.568 |
| v1g103289 | v1g64073 | A7S3R1 | A7RTR3 | Predicted protein. | Predicted protein. | 0.485 |
| v1g103289 | v1g89574 | A7S3R1 | A7RPZ4 | Predicted protein. | Predicted protein. | 0.485 |
| v1g103340 | v1g103289 | A7S3Q8 | A7S3R1 | Predicted protein. | Predicted protein. | 0.481 |
| v1g103340 | v1g144955 | A7S3Q8 | A7T3Y8 | Predicted protein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.568 |
| v1g103340 | v1g64073 | A7S3Q8 | A7RTR3 | Predicted protein. | Predicted protein. | 0.485 |
| v1g103340 | v1g89574 | A7S3Q8 | A7RPZ4 | Predicted protein. | Predicted protein. | 0.485 |
| v1g133 | v1g144955 | A7SV57 | A7T3Y8 | Predicted protein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.529 |
| v1g133 | v1g145132 | A7SV57 | A7T438 | Predicted protein. | Predicted protein. | 0.519 |
| v1g133 | v1g179966 | A7SV57 | A7RMW1 | Predicted protein. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.754 |
| v1g133 | v1g64073 | A7SV57 | A7RTR3 | Predicted protein. | Predicted protein. | 0.608 |
| v1g133 | v1g89574 | A7SV57 | A7RPZ4 | Predicted protein. | Predicted protein. | 0.608 |
| v1g144955 | v1g103289 | A7T3Y8 | A7S3R1 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Predicted protein. | 0.568 |
| v1g144955 | v1g103340 | A7T3Y8 | A7S3Q8 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Predicted protein. | 0.568 |
| v1g144955 | v1g133 | A7T3Y8 | A7SV57 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Predicted protein. | 0.529 |
| v1g144955 | v1g145132 | A7T3Y8 | A7T438 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Predicted protein. | 0.476 |
| v1g144955 | v1g162401 | A7T3Y8 | A7RT76 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Thioredoxin; Belongs to the thioredoxin family. | 0.489 |
| v1g144955 | v1g179966 | A7T3Y8 | A7RMW1 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.496 |
| v1g144955 | v1g201784 | A7T3Y8 | A7RT75 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Predicted protein. | 0.489 |
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