STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g222874Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (363 aa)    
Predicted Functional Partners:
v1g112267
Predicted protein.
    
 0.955
v1g224427
Predicted protein.
     
 0.822
v1g223532
Predicted protein.
   
 
 0.760
v1g235787
Predicted protein; Belongs to the HisA/HisF family.
  
 
 0.740
v1g98072
Predicted protein.
    
  0.727
v1g175375
Predicted protein.
    
  0.726
v1g159041
Predicted protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.708
v1g183894
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 
 0.693
v1g168875
Predicted protein.
  
 0.675
v1g210038
Predicted protein.
  
 0.675
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.