STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g9118Predicted protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (135 aa)    
Predicted Functional Partners:
v1g221743
Predicted protein.
  
0.642
v1g127924
Predicted protein.
  
 
  0.569
v1g147460
Predicted protein.
  
  
  0.565
v1g113370
Predicted protein.
  
  
  0.544
v1g81249
Predicted protein.
  
     0.532
v1g59845
Predicted protein.
  
    0.528
v1g109747
Predicted protein.
  
     0.527
v1g57443
Predicted protein.
  
     0.526
v1g46108
Predicted protein.
  
     0.519
v1g140328
Predicted protein.
  
    0.512
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.