STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g225793Predicted protein. (340 aa)    
Predicted Functional Partners:
v1g30213
Predicted protein.
   
0.898
v1g210048
Predicted protein.
   
 0.791
v1g102086
DNA polymerase.
   
 0.648
v1g102068
Predicted protein.
   
 0.648
v1g152188
Predicted protein; Belongs to the TrpA family.
     
 0.639
v1g76192
Predicted protein.
     
 0.639
v1g129266
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
  
 
 0.631
v1g233970
DNA polymerase.
   
 0.594
v1g208115
Predicted protein.
  
 0.593
v1g156451
Predicted protein.
  
 0.593
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.