STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L0D5S7CIC11C00000004468. (550 aa)    
Predicted Functional Partners:
A0A1L0BZ60
CIC11C00000001401.
    
 0.750
A0A1L0DLL3
CIC11C00000005205.
    
 0.750
ARO1
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.589
A0A1L0BQ94
CIC11C00000000848.
   
 0.550
A0A1L0BVS1
CIC11C00000000574.
   
 0.550
A0A1L0G127
CIC11C00000002893.
   
 0.550
A0A1L0BH53
Tryptophan synthase.
      
 0.443
A0A1L0C274
CIC11C00000001188.
   
  0.428
A0A1L0GLT7
CIC11C00000004068.
    
 
 0.428
Your Current Organism:
Candida intermedia
NCBI taxonomy Id: 45354
Other names: ATCC 14439, ATCC 9442, Blastodendrion intermedium, Blastodendrion intermedius, CBS 572, CCRC 21250, CCRC:21250, Candida intermedia var. intermedia, Cryptococcus intermedius, DBVPG 6218, IFO 0761, Kluyveromyces cellobiovorus, Mycotorula intermedia, NCTC 3147, NRRL Y-981, [. intermedia, [Candida] intermedia
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