STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L0DJX6CIC11C00000000864. (856 aa)    
Predicted Functional Partners:
A0A1L0DMK8
Phosphoinositide phospholipase C.
   
 0.979
A0A1L0BSZ7
CIC11C00000004009.
   
 0.972
A0A1L0D925
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.970
A0A1L0BDZ3
CIC11C00000001011.
   
 0.963
A0A1L0BSX1
CIC11C00000000649.
   
 0.963
A0A1L0G611
CIC11C00000002386.
   
 0.960
A0A1L0BHA1
CIC11C00000003120.
   
 
 0.944
A0A1L0BY43
CIC11C00000001134.
   
  0.944
A0A1L0B9Z5
CIC11C00000004274.
   
 
 0.942
A0A1L0BEN3
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.938
Your Current Organism:
Candida intermedia
NCBI taxonomy Id: 45354
Other names: ATCC 14439, ATCC 9442, Blastodendrion intermedium, Blastodendrion intermedius, CBS 572, CCRC 21250, CCRC:21250, Candida intermedia var. intermedia, Cryptococcus intermedius, DBVPG 6218, IFO 0761, Kluyveromyces cellobiovorus, Mycotorula intermedia, NCTC 3147, NRRL Y-981, [. intermedia, [Candida] intermedia
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