STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXQ85_003647Sorting nexin-3. (160 aa)    
Predicted Functional Partners:
CXQ85_002305
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.983
CXQ85_003359
Uncharacterized protein.
    
 0.980
CXQ85_002645
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.693
CXQ85_001766
Uncharacterized protein.
     
 0.638
CXQ85_004649
USP domain-containing protein.
    
 0.637
CXQ85_001594
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 
 0.591
CXQ85_001803
PX domain-containing protein.
   
 
 0.559
CXQ85_001297
PXA domain-containing protein.
     
 0.534
CXQ85_002650
Uncharacterized protein.
     
 0.534
CXQ85_001387
Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.
    
 
 0.501
Your Current Organism:
Candida haemulonis
NCBI taxonomy Id: 45357
Other names: ATCC 22991, CBS 5149, Candida haemulonii type II, DBVPG 6958, IFO 10001, IGC 3025, JCM 3762, NRRL Y-6693, Torulopsis haemuloni, [. haemulonis, [Candida] haemulonis
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