STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXQ85_00194660S ribosomal protein L21-A. (147 aa)    
Predicted Functional Partners:
CXQ85_000940
Multifunctional fusion protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 0.999
CXQ85_000984
40S ribosomal protein S6.
   
 
 0.999
CXQ85_001087
60S ribosomal protein L33-A.
   
 0.999
CXQ85_003303
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
CXQ85_001289
Ubiquitin-40S ribosomal protein S27a.
   
 0.999
CXQ85_003444
60S ribosomal protein L34-B.
   
 0.999
CXQ85_001554
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.999
CXQ85_001585
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.999
CXQ85_001407
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
   
 0.999
CXQ85_000925
60S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...]
   
 0.999
Your Current Organism:
Candida haemulonis
NCBI taxonomy Id: 45357
Other names: ATCC 22991, CBS 5149, Candida haemulonii type II, DBVPG 6958, IFO 10001, IGC 3025, JCM 3762, NRRL Y-6693, Torulopsis haemuloni, [. haemulonis, [Candida] haemulonis
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