STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXQ85_002715tRNA pseudouridine(38-40) synthase. (508 aa)    
Predicted Functional Partners:
CXQ85_003010
Centromere/microtubule-binding protein CBF5.
   
 0.854
CXQ85_001477
tRNA pseudouridine(55) synthase.
   
 0.849
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.813
CXQ85_003402
Tryptophan synthase.
     
 0.767
CXQ85_001415
Translation machinery-associated protein 7.
  
  
 0.766
CXQ85_003674
Uncharacterized protein.
  
 
 0.732
CXQ85_001531
DNA-directed RNA polymerase I and III subunit RPAC1.
  
  
 0.690
CXQ85_001499
RPOLD domain-containing protein.
  
  
 0.690
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.670
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
 
 0.663
Your Current Organism:
Candida haemulonis
NCBI taxonomy Id: 45357
Other names: ATCC 22991, CBS 5149, Candida haemulonii type II, DBVPG 6958, IFO 10001, IGC 3025, JCM 3762, NRRL Y-6693, Torulopsis haemuloni, [. haemulonis, [Candida] haemulonis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.