STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXQ85_003067Uncharacterized protein. (268 aa)    
Predicted Functional Partners:
CXQ85_000601
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
 0.999
CXQ85_003006
TATA-box-binding protein.
   
 0.996
CXQ85_002451
TFIIB-type domain-containing protein.
   
 0.981
CXQ85_000149
Uncharacterized protein.
   
 0.973
CXQ85_004790
VWFA domain-containing protein.
    
 0.967
CXQ85_003048
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.965
CXQ85_000476
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.963
CXQ85_002905
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.962
CXQ85_002358
DNA repair helicase RAD25.
    
 0.961
CXQ85_004643
DNA-directed RNA polymerase I, II, and III subunit RPABC1.
    
  0.957
Your Current Organism:
Candida haemulonis
NCBI taxonomy Id: 45357
Other names: ATCC 22991, CBS 5149, Candida haemulonii type II, DBVPG 6958, IFO 10001, IGC 3025, JCM 3762, NRRL Y-6693, Torulopsis haemuloni, [. haemulonis, [Candida] haemulonis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.