STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS50199.1Sugar phosphate isomerase/epimerase. (350 aa)    
Predicted Functional Partners:
SIS50176.1
Predicted dehydrogenase.
 
 
 0.978
SIS50222.1
Transcriptional regulator, LacI family.
 
    0.797
SIS50242.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  
    0.762
SIS50264.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  
    0.746
SIS50287.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
    0.743
SIT11397.1
Predicted dehydrogenase.
  
 
 0.628
SIT19493.1
Predicted dehydrogenase.
  
 
 0.582
SIS42060.1
Choline dehydrogenase.
 
     0.577
SIS50311.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
    0.567
SIS89505.1
PTS system, fructose-specific IIC component.
    
  0.556
Your Current Organism:
Rhodobacter aestuarii
NCBI taxonomy Id: 453582
Other names: CCUG 55130, DSM 19945, JCM 14887, R. aestuarii, Rhodobacter aestuarii Venkata Ramana et al. 2009, strain JA296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.