STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS65044.1NitT/TauT family transport system substrate-binding protein. (334 aa)    
Predicted Functional Partners:
SIS65065.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.958
SIS65086.1
NitT/TauT family transport system permease protein.
 
 
  0.936
SIS69016.1
NitT/TauT family transport system permease protein.
 
 
  0.863
SIS42811.1
Putative hydroxymethylpyrimidine transport system permease protein.
 
 
  0.842
SIS69040.1
NitT/TauT family transport system permease protein.
 
 
  0.711
SIS69061.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.704
SIS42800.1
Putative hydroxymethylpyrimidine transport system ATP-binding protein.
  
 
 0.655
SIS41475.1
NitT/TauT family transport system ATP-binding protein.
  
 
 0.655
SIT14867.1
Nitrate/nitrite transport system ATP-binding protein.
  
 
 0.655
SIS95577.1
Response regulator receiver domain-containing protein.
 
  
  0.549
Your Current Organism:
Rhodobacter aestuarii
NCBI taxonomy Id: 453582
Other names: CCUG 55130, DSM 19945, JCM 14887, R. aestuarii, Rhodobacter aestuarii Venkata Ramana et al. 2009, strain JA296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.