STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS86526.1TspO and MBR related proteins. (161 aa)    
Predicted Functional Partners:
SIS86540.1
Phytoene synthase.
 
  
 0.838
SIS86559.1
Phytoene desaturase.
 
  
 0.805
SIS86577.1
Spheroidene monooxygenase.
 
  
 0.708
SIS86491.1
1-hydroxycarotenoid 3,4-desaturase.
 
  
 0.622
SIS99534.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
 
  
 0.591
SIS86598.1
Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.588
SIS86635.1
Magnesium chelatase accessory protein.
 
  
 0.572
SIT12027.1
Spheroidene monooxygenase.
 
  
 0.568
SIS86616.1
Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.523
SIS86840.1
3-vinyl bacteriochlorophyllide hydratase.
  
    0.509
Your Current Organism:
Rhodobacter aestuarii
NCBI taxonomy Id: 453582
Other names: CCUG 55130, DSM 19945, JCM 14887, R. aestuarii, Rhodobacter aestuarii Venkata Ramana et al. 2009, strain JA296
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