STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS90453.1Pimeloyl-ACP methyl ester carboxylesterase. (555 aa)    
Predicted Functional Partners:
SIS45512.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.859
SIS41980.1
Hpt domain-containing protein.
   
 0.744
SIS44935.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.628
SIT19595.1
Phosphate butyryltransferase.
    
 0.627
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.621
SIS47359.1
Acyl carrier protein.
  
 0.621
SIS87450.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.586
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
 0.583
SIS43742.1
methylmalonyl-CoA mutase.
    
 0.542
SIT20915.1
(R)-ethylmalonyl-CoA mutase.
    
 0.542
Your Current Organism:
Rhodobacter aestuarii
NCBI taxonomy Id: 453582
Other names: CCUG 55130, DSM 19945, JCM 14887, R. aestuarii, Rhodobacter aestuarii Venkata Ramana et al. 2009, strain JA296
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