STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT02097.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (442 aa)    
Predicted Functional Partners:
SIT02076.1
Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB.
 0.987
SIS41980.1
Hpt domain-containing protein.
  
 0.929
SIS40706.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.906
SIS90808.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.906
SIS46507.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 0.882
SIS66597.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.834
SIS89566.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.833
SIS45512.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.774
SIS46528.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY.
 
 0.774
SIT06280.1
PAS domain S-box-containing protein.
  
 0.765
Your Current Organism:
Rhodobacter aestuarii
NCBI taxonomy Id: 453582
Other names: CCUG 55130, DSM 19945, JCM 14887, R. aestuarii, Rhodobacter aestuarii Venkata Ramana et al. 2009, strain JA296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.