Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS42045.1 | SIT11075.1 | SAMN05421580_101129 | SAMN05421580_11078 | L-idonate 5-dehydrogenase. | 2-dehydro-3-deoxygluconokinase. | 0.407 |
SIS42045.1 | SIT11998.1 | SAMN05421580_101129 | SAMN05421580_110147 | L-idonate 5-dehydrogenase. | FGGY-family pentulose kinase. | 0.573 |
SIS42045.1 | xylB | SAMN05421580_101129 | SAMN05421580_104101 | L-idonate 5-dehydrogenase. | Xylulokinase. | 0.887 |
SIS46907.1 | SIT04726.1 | SAMN05421580_101587 | SAMN05421580_1096 | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribulose-5-phosphate 3-epimerase. | 0.680 |
SIS46907.1 | SIT10313.1 | SAMN05421580_101587 | SAMN05421580_11032 | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase. | 0.578 |
SIS46907.1 | SIT11075.1 | SAMN05421580_101587 | SAMN05421580_11078 | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 2-dehydro-3-deoxygluconokinase. | 0.889 |
SIS46907.1 | SIT11998.1 | SAMN05421580_101587 | SAMN05421580_110147 | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | FGGY-family pentulose kinase. | 0.886 |
SIS46907.1 | xylB | SAMN05421580_101587 | SAMN05421580_104101 | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Xylulokinase. | 0.898 |
SIT04726.1 | SIS46907.1 | SAMN05421580_1096 | SAMN05421580_101587 | Ribulose-5-phosphate 3-epimerase. | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.680 |
SIT04726.1 | SIT10313.1 | SAMN05421580_1096 | SAMN05421580_11032 | Ribulose-5-phosphate 3-epimerase. | Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase. | 0.578 |
SIT04726.1 | SIT11075.1 | SAMN05421580_1096 | SAMN05421580_11078 | Ribulose-5-phosphate 3-epimerase. | 2-dehydro-3-deoxygluconokinase. | 0.536 |
SIT04726.1 | SIT11998.1 | SAMN05421580_1096 | SAMN05421580_110147 | Ribulose-5-phosphate 3-epimerase. | FGGY-family pentulose kinase. | 0.601 |
SIT04726.1 | xylB | SAMN05421580_1096 | SAMN05421580_104101 | Ribulose-5-phosphate 3-epimerase. | Xylulokinase. | 0.697 |
SIT10313.1 | SIS46907.1 | SAMN05421580_11032 | SAMN05421580_101587 | Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase. | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.578 |
SIT10313.1 | SIT04726.1 | SAMN05421580_11032 | SAMN05421580_1096 | Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase. | Ribulose-5-phosphate 3-epimerase. | 0.578 |
SIT10313.1 | SIT11075.1 | SAMN05421580_11032 | SAMN05421580_11078 | Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase. | 2-dehydro-3-deoxygluconokinase. | 0.520 |
SIT10313.1 | SIT11998.1 | SAMN05421580_11032 | SAMN05421580_110147 | Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase. | FGGY-family pentulose kinase. | 0.764 |
SIT10313.1 | xylB | SAMN05421580_11032 | SAMN05421580_104101 | Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase. | Xylulokinase. | 0.773 |
SIT11075.1 | SIS42045.1 | SAMN05421580_11078 | SAMN05421580_101129 | 2-dehydro-3-deoxygluconokinase. | L-idonate 5-dehydrogenase. | 0.407 |
SIT11075.1 | SIS46907.1 | SAMN05421580_11078 | SAMN05421580_101587 | 2-dehydro-3-deoxygluconokinase. | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.889 |
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