STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT21005.1N-terminal double-transmembrane domain-containing protein. (911 aa)    
Predicted Functional Partners:
SIT21012.1
Uncharacterized membrane protein.
 
     0.965
SIT20996.1
Protein of unknown function DUF58.
 
    0.964
SIT20987.1
MoxR-like ATPase.
 
     0.915
SIT20978.1
Hypothetical protein.
 
     0.794
SIT18512.1
TIGR02302 family protein.
  
    0.773
SIS45959.1
Phytoene/squalene synthetase.
 
 
 0.703
SIT20731.1
Cytochrome P450.
    
 0.683
SIT20815.1
Cytochrome P450.
    
 0.683
SIT20970.1
Hydroxypyruvate isomerase.
       0.643
SIT21020.1
Hypothetical protein.
  
     0.584
Your Current Organism:
Rhodobacter aestuarii
NCBI taxonomy Id: 453582
Other names: CCUG 55130, DSM 19945, JCM 14887, R. aestuarii, Rhodobacter aestuarii Venkata Ramana et al. 2009, strain JA296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.