Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT19977.1 | SIT22317.1 | SAMN05421580_1158 | SAMN05421580_12014 | Putative transposase of IS4/5 family. | Transposase, IS4 family. | 0.795 |
SIT22305.1 | SIT22312.1 | SAMN05421580_12012 | SAMN05421580_12013 | Hypothetical protein. | Hypothetical protein. | 0.767 |
SIT22305.1 | SIT22317.1 | SAMN05421580_12012 | SAMN05421580_12014 | Hypothetical protein. | Transposase, IS4 family. | 0.428 |
SIT22312.1 | SIT22305.1 | SAMN05421580_12013 | SAMN05421580_12012 | Hypothetical protein. | Hypothetical protein. | 0.767 |
SIT22312.1 | SIT22317.1 | SAMN05421580_12013 | SAMN05421580_12014 | Hypothetical protein. | Transposase, IS4 family. | 0.438 |
SIT22317.1 | SIT19977.1 | SAMN05421580_12014 | SAMN05421580_1158 | Transposase, IS4 family. | Putative transposase of IS4/5 family. | 0.795 |
SIT22317.1 | SIT22305.1 | SAMN05421580_12014 | SAMN05421580_12012 | Transposase, IS4 family. | Hypothetical protein. | 0.428 |
SIT22317.1 | SIT22312.1 | SAMN05421580_12014 | SAMN05421580_12013 | Transposase, IS4 family. | Hypothetical protein. | 0.438 |
SIT22317.1 | SIT22322.1 | SAMN05421580_12014 | SAMN05421580_12015 | Transposase, IS4 family. | Transposase, IS5 family. | 0.940 |
SIT22317.1 | SIT22344.1 | SAMN05421580_12014 | SAMN05421580_12019 | Transposase, IS4 family. | Transposase, IS5 family. | 0.847 |
SIT22322.1 | SIT22317.1 | SAMN05421580_12015 | SAMN05421580_12014 | Transposase, IS5 family. | Transposase, IS4 family. | 0.940 |
SIT22344.1 | SIT22317.1 | SAMN05421580_12019 | SAMN05421580_12014 | Transposase, IS5 family. | Transposase, IS4 family. | 0.847 |