Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Igni_0160PFAM: methyltransferase small; Methyltransferase type 12. (194 aa)    
Predicted Functional Partners:
rpl14e
LSU ribosomal protein L14E; PFAM: KOW domain protein; Belongs to the eukaryotic ribosomal protein eL14 family.
  
 0.971
rpl40e
PFAM: Ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
  
 0.966
rpl34e
PFAM: Ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family.
  
 0.962
rpl30e
PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; Belongs to the eukaryotic ribosomal protein eL30 family.
   
 0.959
rps11
SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
 
 0.957
rpl31e
PFAM: Ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family.
   
 0.954
rpl21e
PFAM: ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
   
 0.954
rpl24e
LSU ribosomal protein L24E; Binds to the 23S rRNA.
   
 0.952
rpl15e
PFAM: Ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.950
rpl11
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.
   
 0.950
Your Current Organism:
Ignicoccus hospitalis
NCBI taxonomy Id: 453591
Other names: I. hospitalis KIN4/I, Ignicoccus hospitalis DSM 18386, Ignicoccus hospitalis JCM 14125, Ignicoccus hospitalis KIN4/I, Ignicoccus hospitalis str. KIN4/I, Ignicoccus hospitalis strain KIN4/I
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