Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Igni_0625Hypothetical protein. (335 aa)    
Predicted Functional Partners:
Igni_0628
PFAM: oxidoreductase domain protein; Alcohol dehydrogenase, zinc-binding domain protein.
  
  
 0.817
Igni_0623
PFAM: UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.595
Igni_0440
PFAM: glycosyl transferase, family 2; GtrA family protein.
  
  
 0.557
Igni_0622
PFAM: UDP-glucose/GDP-mannose dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.540
Igni_0289
PFAM: Nucleotidyl transferase.
  
  
 0.503
Igni_0624
Hypothetical protein.
       0.424
Igni_1190
Hypothetical protein.
     
 0.411
Your Current Organism:
Ignicoccus hospitalis
NCBI taxonomy Id: 453591
Other names: I. hospitalis KIN4/I, Ignicoccus hospitalis DSM 18386, Ignicoccus hospitalis JCM 14125, Ignicoccus hospitalis KIN4/I, Ignicoccus hospitalis str. KIN4/I, Ignicoccus hospitalis strain KIN4/I
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