Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Igni_0731PFAM: ABC transporter related; SMART: AAA ATPase. (254 aa)    
Predicted Functional Partners:
Igni_0729
PFAM: inner-membrane translocator.
 
 
 0.999
Igni_0730
PFAM: inner-membrane translocator.
 
 0.999
Igni_0732
PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase.
 
 
0.998
Igni_0139
PFAM: Extracellular ligand-binding receptor.
 
 
 0.991
Igni_0140
PFAM: Extracellular ligand-binding receptor.
 
 
 0.991
pyrH
Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.773
lysY
N2-acetyl-L-aminoadipate semialdehyde dehydrogenase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.
       0.518
Your Current Organism:
Ignicoccus hospitalis
NCBI taxonomy Id: 453591
Other names: I. hospitalis KIN4/I, Ignicoccus hospitalis DSM 18386, Ignicoccus hospitalis JCM 14125, Ignicoccus hospitalis KIN4/I, Ignicoccus hospitalis str. KIN4/I, Ignicoccus hospitalis strain KIN4/I
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