STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igni_0832Uncharacterized protein putative amidase-like protein. (225 aa)    
Predicted Functional Partners:
Igni_0689
PFAM: Creatininase.
  
  
 
0.924
Igni_0910
PFAM: Creatininase.
  
  
 
0.920
Igni_0833
Hypothetical protein.
       0.773
Igni_0834
Hypothetical protein.
       0.773
Igni_0831
PFAM: CBS domain containing protein.
       0.737
Igni_0830
Hypothetical protein.
       0.600
Igni_0815
PFAM: glycosyl transferase, family 2.
  
  
 0.560
Igni_0628
PFAM: oxidoreductase domain protein; Alcohol dehydrogenase, zinc-binding domain protein.
  
    0.542
Igni_0828
Transcriptional regulator containing an HTH domain fused to a Zn-ribbon-like protein.
       0.406
Igni_0829
Citrate transporter; PFAM: Arsenical pump membrane protein; Citrate transporter.
       0.406
Your Current Organism:
Ignicoccus hospitalis
NCBI taxonomy Id: 453591
Other names: I. hospitalis KIN4/I, Ignicoccus hospitalis DSM 18386, Ignicoccus hospitalis JCM 14125, Ignicoccus hospitalis KIN4/I, Ignicoccus hospitalis str. KIN4/I, Ignicoccus hospitalis strain KIN4/I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.