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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igni_0959PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (496 aa)    
Predicted Functional Partners:
Igni_0957
Hypothetical protein.
       0.773
Igni_0958
PFAM: Protein of unknown function DUF54; Belongs to the UPF0201 family.
       0.773
Igni_0956
2, 5-diamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one reductase; PFAM: bifunctional deaminase-reductase domain protein.
  
    0.598
Igni_0859
PFAM: aminotransferase, class I and II.
  
    0.514
Igni_0267
Hypothetical protein.
  
  
 0.487
Igni_0524
Hypothetical protein.
  
  
 0.487
Igni_0581
PFAM: 4-vinyl reductase, 4VR.
  
  
 0.487
Igni_0597
Hypothetical protein.
  
  
 0.487
Igni_0701
Hypothetical protein.
  
  
 0.487
Igni_1239
Hypothetical protein.
  
  
 0.487
Your Current Organism:
Ignicoccus hospitalis
NCBI taxonomy Id: 453591
Other names: I. hospitalis KIN4/I, Ignicoccus hospitalis DSM 18386, Ignicoccus hospitalis JCM 14125, Ignicoccus hospitalis KIN4/I, Ignicoccus hospitalis str. KIN4/I, Ignicoccus hospitalis strain KIN4/I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.