STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0FKU9Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
A0A0E0GED5
Uncharacterized protein.
  
     0.487
A0A0E0IXH0
Uncharacterized protein.
  
     0.446
A0A0E0HEZ0
Uncharacterized protein.
  
     0.436
A0A0E0FRU7
Uncharacterized protein.
  
     0.433
A0A0E0FVK9
Uncharacterized protein.
  
     0.430
A0A0E0HNT9
Uncharacterized protein.
  
     0.428
A0A0E0GZT4
Uncharacterized protein.
  
     0.424
A0A0E0HS38
Uncharacterized protein.
  
     0.424
A0A0E0IRT6
Uncharacterized protein.
  
     0.419
A0A0E0H563
Uncharacterized protein.
  
     0.413
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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