STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0FM49LOB domain-containing protein. (331 aa)    
Predicted Functional Partners:
A0A0E0JCS3
NAC domain-containing protein.
  
   
 0.660
A0A0E0HRX1
NAC domain-containing protein.
  
   
 0.614
A0A0E0G4E9
NAC domain-containing protein.
  
   
 0.607
A0A0E0FTC9
Uncharacterized protein.
  
     0.531
A0A0E0GQV2
Uncharacterized protein.
  
     0.517
A0A0E0JC47
Uncharacterized protein.
  
     0.512
A0A0E0GFY5
Uncharacterized protein.
  
   
 0.510
A0A0E0FV62
LOB domain-containing protein.
  
   
 0.497
A0A0E0H3Y4
Uncharacterized protein.
  
     0.492
A0A0E0FVL8
Uncharacterized protein.
  
     0.489
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.