Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0FZ95Uncharacterized protein. (168 aa)    
Predicted Functional Partners:
A0A0E0HNL6
Uncharacterized protein.
   
 0.679
A0A0E0I8Q7
Uncharacterized protein.
   
 0.643
A0A0E0H483
SWIRM domain-containing protein.
    
 0.619
A0A0E0G4W5
Uncharacterized protein.
   
 
 0.595
A0A0E0GCY2
TPR_REGION domain-containing protein.
    
 0.575
A0A0E0GSJ8
TPR_REGION domain-containing protein.
    
 0.575
A0A0E0HST0
Uncharacterized protein.
    
  0.571
A0A0E0IYB0
Uncharacterized protein.
    
  0.571
A0A0E0FKQ6
Usp domain-containing protein.
    
 0.564
A0A0E0HPH8
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
 0.536
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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