STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0G5Y6Pectinesterase. (319 aa)    
Predicted Functional Partners:
A0A0E0G9A6
Uncharacterized protein.
    
 0.768
A0A0E0FRC4
Uncharacterized protein.
    
 0.686
A0A0E0GFP9
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.637
A0A0E0GX40
Uncharacterized protein.
   
 
 0.628
A0A0E0IMZ2
Uncharacterized protein.
    
 0.610
A0A0E0GE84
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.588
A0A0E0IXN2
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
   0.577
A0A0E0GB35
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
  0.561
A0A0E0FPX5
WD_REPEATS_REGION domain-containing protein.
    
 0.550
A0A0E0I7S3
WD_REPEATS_REGION domain-containing protein.
    
 0.550
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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