STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0G886Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (225 aa)    
Predicted Functional Partners:
A0A0E0IYY3
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.885
A0A0E0J9T6
DHFR domain-containing protein.
   
 
 0.885
A0A0E0J2H1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.805
A0A0E0HJT6
Uncharacterized protein.
  
 0.740
A0A0E0GDD5
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.739
A0A0E0ID56
Uncharacterized protein.
  
 0.739
A0A0E0ID59
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.739
A0A0E0IN49
MaoC-like domain-containing protein.
  
 0.728
A0A0E0HHX6
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.726
A0A0E0I0Y5
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.726
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.