STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0GB75Uncharacterized protein. (121 aa)    
Predicted Functional Partners:
A0A0E0H7S6
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.910
A0A0E0HNP0
Uncharacterized protein.
    
 0.882
A0A0E0I5G2
Xylose isomerase.
     
 0.844
A0A0E0HXV1
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P. Belongs to the phosphohexose mutase family.
  
 
 0.840
A0A0E0GRC3
Uncharacterized protein.
  
 
 0.819
A0A0E0HZX4
Uncharacterized protein.
  
 
 0.819
A0A0E0GUG3
VARLMGL domain-containing protein.
  
 
 0.790
A0A0E0GUG7
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.790
A0A0E0HNM5
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.790
A0A0E0IDE9
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.790
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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