STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0GF46PPC domain-containing protein. (394 aa)    
Predicted Functional Partners:
A0A0E0G6G1
Uncharacterized protein.
    
 
 0.700
A0A0E0IN46
Uncharacterized protein.
    
 
 0.700
A0A0E0GBZ2
Uncharacterized protein.
    
 0.584
A0A0E0IRD5
Uncharacterized protein.
    
 0.570
A0A0E0FVB2
BHLH domain-containing protein.
  
 
 
 0.536
A0A0E0HNC1
Ribosomal_S27 domain-containing protein.
    
 0.534
A0A0E0GP19
Uncharacterized protein.
    
  0.520
A0A0E0FFV1
Uncharacterized protein.
  
 
  0.519
A0A0E0GPZ0
Uncharacterized protein.
  
 
  0.517
A0A0E0FF11
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.513
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.