STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0GM65RING-type domain-containing protein. (175 aa)    
Predicted Functional Partners:
A0A0E0HNC1
Ribosomal_S27 domain-containing protein.
    
 0.551
A0A0E0GVD5
Ubiquitin-like domain-containing protein.
    
 0.512
A0A0E0I101
Ribosomal_L40e domain-containing protein.
    
 0.512
A0A0E0ILG1
Ubiquitin-like domain-containing protein.
    
 0.512
A0A0E0H8V4
HECT domain-containing protein.
    
 0.449
A0A0E0HFN9
HECT domain-containing protein.
    
 0.449
A0A0E0FZT0
HECT domain-containing protein.
     
 0.434
A0A0E0FY79
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.424
A0A0E0FJ60
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.417
A0A0E0FR91
Sde2_N_Ubi domain-containing protein.
    
  0.417
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
Server load: low (20%) [HD]