STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0GQN6Uncharacterized protein. (164 aa)    
Predicted Functional Partners:
A0A0E0FGU5
DUF1421 domain-containing protein.
    
 0.719
A0A0E0FIZ1
Uncharacterized protein.
   
 0.706
A0A0E0FJF5
Uncharacterized protein.
   
 0.706
A0A0E0G0A3
Uncharacterized protein.
   
 0.706
A0A0E0G5G8
Uncharacterized protein.
   
 0.706
A0A0E0GSS1
Uncharacterized protein.
   
 0.706
A0A0E0HGV9
Uncharacterized protein.
   
 0.706
A0A0E0HLD3
Uncharacterized protein.
   
 0.706
A0A0E0HN41
Uncharacterized protein.
   
 0.706
A0A0E0J133
Uncharacterized protein.
   
 0.706
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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