STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0GRB7Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
A0A0E0G750
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.840
A0A0E0IC31
Uncharacterized protein.
    
 0.694
A0A0E0FUI8
GHMP_kinases_N domain-containing protein.
     
 0.638
A0A0E0GSN4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.635
A0A0E0GD93
Peptidylprolyl isomerase.
   
 0.615
A0A0E0GLP2
Guanylate kinase-like domain-containing protein.
   
 0.593
A0A0E0HJ27
Guanylate kinase-like domain-containing protein.
   
 0.593
A0A0E0G1X5
PMD domain-containing protein.
   
 0.578
A0A0E0GVJ8
PMD domain-containing protein.
   
 0.578
A0A0E0J3H9
PMD domain-containing protein.
   
 0.578
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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