STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0GRI5Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (406 aa)    
Predicted Functional Partners:
A0A0E0JBB8
Uncharacterized protein.
  
 0.949
A0A0E0FLX8
Uncharacterized protein.
  
 
 0.935
A0A0E0J8C8
Uncharacterized protein.
  
 
 0.919
A0A0E0GU42
Semialdhyde_dh domain-containing protein.
  
 
 0.914
A0A0E0GX18
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.910
A0A0E0H1W0
Uncharacterized protein.
    
 0.900
A0A0E0IF81
Uncharacterized protein.
    
 0.897
A0A0E0IW29
Uncharacterized protein.
     
 0.886
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
   
 
 0.884
A0A0E0GGX1
N-acetyltransferase domain-containing protein.
    
 0.871
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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