STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0GVU8Uncharacterized protein. (842 aa)    
Predicted Functional Partners:
A0A0E0FGK6
BHLH domain-containing protein.
    
 0.795
A0A0E0GVG0
Uncharacterized protein.
    
 0.795
A0A0E0HA20
Uncharacterized protein.
    
 0.795
A0A0E0IDD9
BHLH domain-containing protein.
    
 0.795
A0A0E0IKX7
BHLH domain-containing protein.
    
 0.795
A0A0E0FHZ3
Uncharacterized protein.
   
 0.742
A0A0E0HZ41
Uncharacterized protein.
   
 0.742
A0A0E0HVF2
HATPase_c domain-containing protein.
   
 0.732
A0A0E0IN34
Uncharacterized protein.
    
  0.664
A0A0E0HQI9
BAF250_C domain-containing protein.
    
 0.648
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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