STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0H7J3Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (301 aa)    
Predicted Functional Partners:
psaA-2
Photosystem I P700 chlorophyll a apoprotein A1.
    
 0.602
A0A0E0J5T2
Clathrin-link domain-containing protein.
    
 0.602
A0A0E0GFX7
AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.
    
 0.523
A0A0E0HKB4
Uncharacterized protein.
  
     0.469
A0A0E0GMI5
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.468
A0A0E0IX20
PPM-type phosphatase domain-containing protein.
    
 
 0.459
A0A0E0GCV5
GRAM domain-containing protein.
  
     0.456
A0A0E0FPQ7
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.453
A0A0E0HH52
Uncharacterized protein.
  
     0.451
A0A0E0G607
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.448
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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