STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFK-5ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (567 aa)    
Predicted Functional Partners:
A0A0E0FY83
Uncharacterized protein.
  
 
 0.956
A0A0E0IDE9
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.943
A0A0E0IKZ3
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.943
A0A0E0HA21
CBM20 domain-containing protein.
    
 0.942
A0A0E0GYA0
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.941
A0A0E0HKI3
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.941
A0A0E0GUG7
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.940
A0A0E0HNM5
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.940
A0A0E0J531
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.937
A0A0E0HNP0
Uncharacterized protein.
  
 
 0.935
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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