STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0HR14Uncharacterized protein. (162 aa)    
Predicted Functional Partners:
A0A0E0J8I5
Uncharacterized protein.
   
 
 0.827
A0A0E0GTG8
WD_REPEATS_REGION domain-containing protein.
   
    0.802
A0A0E0FR29
Uncharacterized protein.
  
   0.800
A0A0E0H5B9
WD_REPEATS_REGION domain-containing protein.
   
    0.795
A0A0E0FTT4
TRUD domain-containing protein.
   
   0.777
A0A0E0HGR5
TRUD domain-containing protein.
   
   0.777
A0A0E0G4K8
Uncharacterized protein.
   
   0.766
A0A0E0HI16
Uncharacterized protein.
   
   0.766
A0A0E0GWA9
Uncharacterized protein.
  
  
 0.764
A0A0E0IYU8
Uncharacterized protein.
   
    0.761
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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