STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0HUP4Uncharacterized protein. (701 aa)    
Predicted Functional Partners:
A0A0E0IKC8
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.665
A0A0E0FU73
Uncharacterized protein.
   
 
 0.599
A0A0E0GDA6
M16C_associated domain-containing protein.
    
 
 0.571
A0A0E0GMP1
AMP_N domain-containing protein.
   
 
 0.550
A0A0E0FK28
VQ domain-containing protein.
   
 
 0.515
A0A0E0GLN9
VQ domain-containing protein.
   
 
 0.515
A0A0E0FJ32
Uncharacterized protein.
  
  
 0.503
A0A0E0FS07
Uncharacterized protein; Belongs to the peptidase M16 family.
   
  
 0.489
A0A0E0GIX1
Uncharacterized protein; Belongs to the peptidase M16 family.
   
  
 0.489
A0A0E0I6V6
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
  
 0.487
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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