STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0HYV9LEA_2 domain-containing protein. (227 aa)    
Predicted Functional Partners:
A0A0E0GLH0
Uncharacterized protein.
  
     0.542
A0A0E0H627
Uncharacterized protein.
  
     0.531
A0A0E0H264
FBD domain-containing protein.
  
     0.529
A0A0E0G8V0
Uncharacterized protein.
  
     0.528
A0A0E0GT56
Uncharacterized protein.
  
     0.524
A0A0E0H9J2
Uncharacterized protein.
  
     0.524
A0A0E0J8T4
Uncharacterized protein.
  
     0.522
A0A0E0FH94
Uncharacterized protein.
  
     0.517
A0A0E0IF56
Uncharacterized protein.
  
     0.517
A0A0E0GB07
DUF295 domain-containing protein.
  
     0.515
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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