STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0I7R4Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
A0A0E0IAP9
Uncharacterized protein.
 
   
 0.594
A0A0E0IEC5
Uncharacterized protein.
  
     0.483
A0A0E0H2E9
Uncharacterized protein.
      
 0.473
A0A0E0GF94
TCP domain-containing protein.
  
     0.465
A0A0E0JA90
GRAM domain-containing protein.
  
     0.452
A0A0E0GCS2
Uncharacterized protein.
  
     0.436
A0A0E0FJ74
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.431
A0A0E0I671
Uncharacterized protein.
      
 0.430
A0A0E0GUL8
PORR domain-containing protein.
      
 0.429
A0A0E0FWG8
Uncharacterized protein.
      
 0.426
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
Server load: low (20%) [HD]