STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0IJU1Uncharacterized protein. (699 aa)    
Predicted Functional Partners:
A0A0E0G750
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.741
A0A0E0H9A1
Serine/threonine-protein phosphatase.
    
 0.641
A0A0E0IL97
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
   
 
 0.606
A0A0E0FRJ7
Serine/threonine-protein phosphatase.
    
 0.582
A0A0E0FPK4
TPR_REGION domain-containing protein.
    
 0.555
A0A0E0HB23
TPR_REGION domain-containing protein.
    
 0.555
A0A0E0IVV9
TPR_REGION domain-containing protein.
    
 0.555
A0A0E0IKJ7
Uncharacterized protein.
   
 0.551
A0A0E0J5L9
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.551
A0A0E0HNC1
Ribosomal_S27 domain-containing protein.
    
  0.545
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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