STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0IN34Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
A0A0E0FM83
Uncharacterized protein.
   
 0.989
A0A0E0HPB2
Uncharacterized protein.
   
 0.989
A0A0E0IGS1
Uncharacterized protein.
   
 0.989
A0A0E0GHB5
Serine/threonine-protein phosphatase.
    
 0.977
A0A0E0GV72
Serine/threonine-protein phosphatase.
    
 0.977
A0A0E0HST6
Serine/threonine-protein phosphatase.
    
 0.977
A0A0E0IRY9
Serine/threonine-protein phosphatase.
    
 0.977
A0A0E0IY83
Serine/threonine-protein phosphatase.
    
 0.977
A0A0E0FP66
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.971
A0A0E0G3P1
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.971
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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