STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0IRB2Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
A0A0E0IMB5
Uncharacterized protein.
   
 
 0.936
A0A0E0GSQ9
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
 0.931
A0A0E0GC74
Uncharacterized protein.
    
 
 0.924
A0A0E0HGR3
Uncharacterized protein.
   
  0.924
A0A0E0I4W1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.924
A0A0E0GEU7
Epimerase domain-containing protein.
  
   0.895
A0A0E0FTI7
Uncharacterized protein.
   
   0.893
A0A0E0IH90
Uncharacterized protein.
   
   0.892
A0A0E0GLI6
Uncharacterized protein.
   
   0.890
A0A0E0HY73
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.890
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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