STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0ISL6Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
A0A0E0HMH2
Uncharacterized protein.
  
 
  0.607
A0A0E0HIH4
Homeobox domain-containing protein.
  
  0.588
A0A0E0J6F0
Uncharacterized protein.
  
 
  0.572
A0A0E0J258
Uncharacterized protein.
  
 
   0.562
A0A0E0G4F9
Uncharacterized protein.
  
 
   0.554
A0A0E0HBA0
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
   0.549
A0A0E0G7C0
Uncharacterized protein.
  
 
   0.541
A0A0E0H832
Uncharacterized protein.
  
 
   0.539
A0A0E0I9Z0
C2H2-type domain-containing protein.
  
 
  0.536
A0A0E0FFW4
FHA domain-containing protein.
    
  0.535
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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