STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0IYE4Uncharacterized protein. (1900 aa)    
Predicted Functional Partners:
A0A0E0FXR9
Sister chromatid cohesion protein.
   
    0.831
A0A0E0H9G6
Chromatin-remodeling complex ATPase.
   
 
 0.633
A0A0E0FU94
Uncharacterized protein.
   
 
 0.628
A0A0E0FU96
Uncharacterized protein.
   
 
 0.628
A0A0E0GT05
Uncharacterized protein.
   
 
 0.628
A0A0E0GT14
Uncharacterized protein.
   
 
 0.628
A0A0E0GT57
Uncharacterized protein.
   
 
 0.628
A0A0E0HQM5
Uncharacterized protein.
   
 
 0.628
A0A0E0IBE1
Uncharacterized protein.
   
 
 0.628
A0A0E0IHY7
Uncharacterized protein.
   
 
 0.628
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.