STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0IYN3Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
A0A0E0HNL6
Uncharacterized protein.
   
 0.658
A0A0E0H802
Protein kinase domain-containing protein.
    
 0.651
A0A0E0GIR7
WD_REPEATS_REGION domain-containing protein.
    
 0.637
A0A0E0GGW8
Uncharacterized protein.
    
 0.612
A0A0E0GB35
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.597
A0A0E0GBZ2
Uncharacterized protein.
   
 0.594
A0A0E0IRN9
Uncharacterized protein.
    
 0.563
A0A0E0J4X4
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.563
A0A0E0FT23
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.562
GATC
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
    
 0.562
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.