STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0J678Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
A0A0E0IXN2
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.985
A0A0E0GX40
Uncharacterized protein.
   
 0.984
A0A0E0GRK8
Uncharacterized protein.
   
 0.983
A0A0E0GUX4
Ribos_L4_asso_C domain-containing protein.
  
 0.981
A0A0E0HNC1
Ribosomal_S27 domain-containing protein.
   
 0.979
A0A0E0FIK5
Uncharacterized protein.
  
 0.978
A0A0E0GE84
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.974
A0A0E0GV00
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.967
A0A0E0HKI6
Ribosomal_S10 domain-containing protein.
  
 0.967
A0A0E0HXI2
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.967
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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