STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JCA4CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (248 aa)    
Predicted Functional Partners:
A0A0E0I0J8
LEA_2 domain-containing protein.
  
     0.516
A0A0E0GHW5
Uncharacterized protein.
  
     0.499
A0A0E0I4H9
EF-hand domain-containing protein.
  
     0.491
A0A0E0H466
bHLH-MYC_N domain-containing protein.
  
     0.489
A0A0E0FNG2
bHLH-MYC_N domain-containing protein.
  
     0.480
A0A0E0GUA4
Uncharacterized protein.
  
     0.478
A0A0E0G6N2
Uncharacterized protein.
  
     0.476
A0A0E0FFS4
Uncharacterized protein.
  
     0.470
A0A0E0HDD1
Uncharacterized protein.
  
     0.463
A0A0E0JBY8
Uncharacterized protein.
  
     0.462
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.