STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAT04713.1HYPOTHETICAL PROTEIN. (273 aa)    
Predicted Functional Partners:
CAT04884.1
HYPOTHETICAL PROTEIN.
 
     0.778
CAT05291.1
HYPOTHETICAL PROTEIN.
  
     0.621
CAT04956.1
HYPOTHETICAL PROTEIN.
  
     0.608
CAT04711.1
HYPOTHETICAL PROTEIN; Belongs to the SUA5 family.
       0.601
CAT04928.1
Lipoprotein.
  
    0.586
CAT04991.1
HYPOTHETICAL Uncharacterized protein MG366.
  
     0.576
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]
       0.556
CAT04716.1
HYPOTHETICAL PROTEIN.
 
     0.537
CAT05408.1
HYPOTHETICAL PROTEIN.
  
     0.483
CAT05368.1
HYPOTHETICAL PROTEIN.
  
     0.479
Your Current Organism:
Mycoplasma conjunctivae
NCBI taxonomy Id: 45361
Other names: ATCC 25834, M. conjunctivae, Mesomycoplasma conjunctivae, NCTC 10147, strain HRC/583
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